Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Sminthopsis granulipes (white-tailed dunnart)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Sminthopsis

Attributes

geographic location	Australia
investigation type	phylogenetic study
sample name	55310
sex	not determined
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/8ea7c083-0ff8-460b-b3fb-37de42506910
BPA_library_ID	55310
BPA_sample_ID	41899
CALLABLE	1470128
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:41:55Z
External Id	SAMEA7321293
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:41:55Z
INSDC status	public
LOW_COVERAGE	107167
NO_COVERAGE	264
ReadLength	150bp
Submitter Id	55310
TCCP_ID	55310_HWWJFAFXY_TTCAACC_S73
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	white-tailed dunnart
depthmean	265.19
depthmedian	182
family	Dasyuridae
genus	Sminthopsis
geographic location (region and locality)	Western Australia
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	Near Mount Holland
order	Dasyuromorphia
phylum	Chordata
scientific_name	Sminthopsis granulipes
sequencing method	Illumina SBS, short PE reads
species	granulipes
state_or_region	Western Australia
tissue_number	ABTC07703
tissue_preservation	ethanol \| frozen
totalmapped2tgt	0.647
totalpaired	0.6271
totalreadsstart	5246080
voucher_number	WAM M20088
voucher_or_tissue_number	WAM M20088