Australian marsupial phylogenetic study. Bioplatfo... - BioSample

Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

Organism: Notoryctes typhlops (marsupial mole)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Notoryctemorphia; Notoryctidae; Notoryctes

Attributes

geographic location	Australia
investigation type	phylogenetic study
sample name	55321
sex	not determined
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/2c6ab7e2-19bd-43c5-a081-bc8ea306f8e2
BPA_library_ID	55321
BPA_sample_ID	41910
CALLABLE	910655
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:42:14Z
External Id	SAMEA7321303
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:42:14Z
INSDC status	public
LOW_COVERAGE	90882
NO_COVERAGE	104
ReadLength	150bp
Submitter Id	55321
TCCP_ID	55321_HWWJFAFXY_GATGCCA_S26
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	marsupial mole
decimal_latitude	-26.17
decimal_longitude	130.5
depthmean	179.02
depthmedian	52
family	Notoryctidae
genus	Notoryctes
geographic location (region and locality)	South Australia
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	38km WNW Mount Caroline, Pitjantjatjara Lands
order	Notoryctemorphia
phylum	Chordata
scientific_name	Notoryctes typhlops
sequencing method	Illumina SBS, short PE reads
species	typhlops
state_or_region	South Australia
tissue_number	ABTC27520
tissue_preservation	ethanol \| frozen
totalmapped2tgt	0.5626
totalpaired	0.5361
totalreadsstart	2943714
voucher_number	SAMA M19910
voucher_or_tissue_number	SAMA M19910

BioProject: PRJEB39788 Australian marsupial phylogeny
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