Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Sminthopsis bindi
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Sminthopsis

Attributes

geographic location	Australia
investigation type	phylogenetic study
sample name	55322
sex	not determined
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/afc2b92e-8d7d-412e-9548-b60e7554fbfa
BPA_library_ID	55322
BPA_sample_ID	41911
CALLABLE	1587448
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:42:15Z
External Id	SAMEA7321304
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:42:15Z
INSDC status	public
LOW_COVERAGE	171461
NO_COVERAGE	264
ReadLength	150bp
Submitter Id	55322
TCCP_ID	55322_HWWJFAFXY_TCATGGT_S34
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	Kakadu dunnart
depthmean	101.81
depthmedian	78
family	Dasyuridae
genus	Sminthopsis
geographic location (region and locality)	Northern Territory
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	Litchfield National Park
order	Dasyuromorphia
phylum	Chordata
scientific_name	Sminthopsis bindi
sequencing method	Illumina SBS, short PE reads
species	bindi
state_or_region	Northern Territory
tissue_number	ABTC29676
tissue_preservation	ethanol \| frozen
totalmapped2tgt	0.803
totalpaired	0.7913
totalreadsstart	1740163
voucher_number	no voucher
voucher_or_tissue_number	ABTC29676