Australian marsupial phylogenetic study. Bioplatfo... - BioSample

Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

Organism: Sminthopsis virginiae (red-cheeked dunnart)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Sminthopsis

Attributes

geographic location	Australia
identified by	P G Horner
investigation type	phylogenetic study
sample name	55323
sex	not determined
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/6546e556-e7fc-4f78-9db3-223bea636942
BPA_library_ID	55323
BPA_sample_ID	41912
CALLABLE	1211370
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:42:17Z
External Id	SAMEA7321305
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:42:17Z
INSDC status	public
LOW_COVERAGE	126377
NO_COVERAGE	1063
ReadLength	150bp
Submitter Id	55323
TCCP_ID	55323_HWWJFAFXY_CGCGCAG_S42
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	red-cheeked dunnart
decimal_latitude	-13.41
decimal_longitude	130.9
depthmean	114.91
depthmedian	65
family	Dasyuridae
genus	Sminthopsis
geographic location (region and locality)	Northern Territory
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	Litchfield National Park
order	Dasyuromorphia
phylum	Chordata
scientific_name	Sminthopsis virginiae
sequencing method	Illumina SBS, short PE reads
species	virginiae
state_or_region	Northern Territory
tissue_number	ABTC29717
tissue_preservation	ethanol \| frozen
totalmapped2tgt	0.7399
totalpaired	0.7215
totalreadsstart	1718629
voucher_number	MAGNT U4325
voucher_or_tissue_number	MAGNT U4325

BioProject: PRJEB39788 Australian marsupial phylogeny
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