Australian marsupial phylogenetic study. Bioplatfo... - BioSample

Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

Organism: Sminthopsis murina (narrow-footed marsupial mouse)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Sminthopsis

Attributes

geographic location	Australia
identified by	Queale
investigation type	phylogenetic study
sample name	55324
sex	not determined
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/e4c2c89c-63e8-49b1-8de1-d8dfa255c2ee
BPA_library_ID	55324
BPA_sample_ID	41913
CALLABLE	1473116
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:42:19Z
External Id	SAMEA7321306
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:42:19Z
INSDC status	public
LOW_COVERAGE	175080
NO_COVERAGE	284
ReadLength	150bp
Submitter Id	55324
TCCP_ID	55324_HWWJFAFXY_AACTAGA_S50
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	narrow-footed marsupial mouse
decimal_latitude	-34.62
decimal_longitude	139.5
depthmean	52.54
depthmedian	40
family	Dasyuridae
genus	Sminthopsis
geographic location (region and locality)	South Australia
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	10km NNE, Black Hill
order	Dasyuromorphia
phylum	Chordata
scientific_name	Sminthopsis murina
sequencing method	Illumina SBS, short PE reads
species	murina
state_or_region	South Australia
tissue_number	ABTC34594
tissue_preservation	ethanol \| frozen
totalmapped2tgt	0.7758
totalpaired	0.7578
totalreadsstart	886359
voucher_number	SAMA M16715
voucher_or_tissue_number	SAMA M16715

BioProject: PRJEB39788 Australian marsupial phylogeny
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