Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Echymipera clara (Clara's echymipera)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Peramelemorphia; Peroryctidae; Echymipera

Attributes

geographic location	Papua New Guinea
investigation type	phylogenetic study
sample name	55331
sex	female
tissue	liver
BPA_library_ID	55331
BPA_sample_ID	41920
CALLABLE	1140410
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:42:30Z
External Id	SAMEA7321312
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:42:30Z
INSDC status	public
LOW_COVERAGE	108010
NO_COVERAGE	168
ReadLength	150bp
Submitter Id	55331
TCCP_ID	55331_HWWJFAFXY_AACTCCG_S11
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	Clara's echymipera
decimal_latitude	-4.58
decimal_longitude	141.17
depthmean	158.53
depthmedian	107
family	Peramelidae
genus	Echymipera
geographic location (region and locality)	Sandaun Province
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	Tibi
order	Peramelemorphia
phylum	Chordata
scientific_name	Echymipera clara
sequencing method	Illumina SBS, short PE reads
species	clara
state_or_region	Sandaun Province
tissue_number	ABTC42568
tissue_preservation	ethanol \| frozen
totalmapped2tgt	0.6088
totalpaired	0.5804
totalreadsstart	2760090
voucher_number	AM M.13500
voucher_or_tissue_number	AM M.13500