Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Pseudochirops cupreus (coppery ringtail possum)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Pseudocheiridae; Pseudochirops

Attributes

geographic location	Papua New Guinea
investigation type	phylogenetic study
sample name	55340
sex	male
tissue	liver
BPA_library_ID	55340
BPA_sample_ID	41929
CALLABLE	1228042
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:42:45Z
External Id	SAMEA7321320
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:42:45Z
INSDC status	public
LOW_COVERAGE	123544
NO_COVERAGE	81
ReadLength	150bp
Submitter Id	55340
TCCP_ID	55340_HWWJFAFXY_TTCTAGG_S83
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	coppery ringtail possum
decimal_latitude	-5.1
decimal_longitude	141.7
depthmean	87.97
depthmedian	64
family	Pseudocheiridae
genus	Pseudochirops
geographic location (region and locality)	Sandaun Province
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	Sol River
order	Diprotodontia
phylum	Chordata
scientific_name	Pseudochirops cupreus
sequencing method	Illumina SBS, short PE reads
species	cupreus
state_or_region	Sandaun Province
tissue_number	ABTC47497
tissue_preservation	ethanol \| frozen
totalmapped2tgt	0.6104
totalpaired	0.578
totalreadsstart	1669641
voucher_number	AM M.16666
voucher_or_tissue_number	AM M.16666