Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Phascolosorex dorsalis (narrow-striped marsupial shrew)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Phascolosorex

Attributes

geographic location	Papua New Guinea
investigation type	phylogenetic study
sample name	55345
sex	not determined
tissue	liver
BPA_library_ID	55345
BPA_sample_ID	41934
CALLABLE	1703426
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:42:55Z
External Id	SAMEA7321325
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:42:55Z
INSDC status	public
LOW_COVERAGE	153955
NO_COVERAGE	142
ReadLength	150bp
Submitter Id	55345
TCCP_ID	55345_HWWJFAFXY_TTGAAGT_S12
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	narrow-striped marsupial shrew
depthmean	229.71
depthmedian	169
family	Dasyuridae
genus	Phascolosorex
geographic location (region and locality)	Morobe Province
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	Mount Kaindi
order	Dasyuromorphia
phylum	Chordata
scientific_name	Phascolosorex dorsalis
sequencing method	Illumina SBS, short PE reads
species	dorsalis
state_or_region	Morobe Province
tissue_number	ABTC51420
tissue_preservation	ethanol \| frozen
totalmapped2tgt	0.7483
totalpaired	0.7324
totalreadsstart	4455403
voucher_number	no voucher
voucher_or_tissue_number	ABTC51420