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Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

Identifiers
BioSample: SAMEA7321331; SRA: ERS5079866
Organism
Antechinomys laniger
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Antechinomys
Attributes
geographic locationAustralia
investigation typephylogenetic study
sample name55351
sexmale
AtlasLivingAustraliahttps://biocache.ala.org.au/occurrences/e38a202d-a672-478a-8263-ff1261c7b575
BPA_library_ID55351
BPA_sample_ID41940
CALLABLE1545939
DNA extraction methodsalting out
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2021-01-05T04:27:29Z
ENA-LAST-UPDATE2020-09-25T00:43:04Z
External IdSAMEA7321331
INSDC center nameAUSTRALIAN NATIONAL UNIVERSITY
INSDC first public2021-01-05T04:27:29Z
INSDC last update2020-09-25T00:43:04Z
INSDC statuspublic
LOW_COVERAGE183432
NO_COVERAGE360
ReadLength150bp
Submitter Id55351
TCCP_ID55351_HWWJFAFXY_TACTTAG_S60
bioproject_accessionPRJEB39788
classMammalia
collectionMammal
common nameKultarr
decimal_latitude-28.1
decimal_longitude144.85
depthmean101.97
depthmedian73
familyDasyuridae
genusAntechinomys
geographic location (region and locality)Queensland
institution_nameAustralian National Wildlife Collection
location_textBundoona Station, 80Km W of Cunnamulla
orderDiprotodontia
phylumChordata
scientific_nameAntechinomys laniger
sequencing methodIllumina SBS, short PE reads
specieslaniger
state_or_regionQueensland
tissue_numberANWC M24613
tissue_preservationmuscle
totalmapped2tgt0.7688
totalpaired0.7532
totalreadsstart1816273
voucher_numberANWC M24613
voucher_or_tissue_numberANWC M24613
BioProject
PRJEB39788 Australian marsupial phylogeny
Retrieve all samples from this project

Submission
EBI; 2021-01-06
Accession:
SAMEA7321331
ID:
17239787

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