Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Sminthopsis aitkeni (Kangaroo Island dunnart)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Sminthopsis

Attributes

geographic location	Australia
identified by	Catherine Kemper
investigation type	phylogenetic study
sample name	55355
sex	not determined
tissue	liver
BPA_library_ID	55355
BPA_sample_ID	41944
CALLABLE	1612583
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:43:11Z
External Id	SAMEA7321335
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:43:11Z
INSDC status	public
LOW_COVERAGE	136743
NO_COVERAGE	79
ReadLength	150bp
Submitter Id	55355
TCCP_ID	55355_HWWJFAFXY_GCTAATC_S92
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	Kangaroo Island dunnart
decimal_latitude	-35.82
decimal_longitude	136.93
depthmean	208.35
depthmedian	157
family	Dasyuridae
genus	Sminthopsis
geographic location (region and locality)	South Australia
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	5km SW (A), Gosse, Flinders Chase National Park, Kangaroo Island
order	Dasyuromorphia
phylum	Chordata
scientific_name	Sminthopsis aitkeni
sequencing method	Illumina SBS, short PE reads
species	aitkeni
state_or_region	South Australia
tissue_number	ABTC79282
tissue_preservation	ethanol \| frozen
totalmapped2tgt	0.7391
totalpaired	0.7231
totalreadsstart	3913783
voucher_number	SAMA M21468
voucher_or_tissue_number	SAMA M21468