Australian marsupial phylogenetic study. Bioplatfo... - BioSample

Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

Organism: Antechinus agilis (Agile antechinus)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Antechinus

Attributes

geographic location	Australia
identified by	Catherine Kemper
investigation type	phylogenetic study
sample name	55356
sex	not determined
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/b4177c2c-8316-4db0-bd69-3f2ea7f8bfeb
BPA_library_ID	55356
BPA_sample_ID	41945
CALLABLE	1601496
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:43:12Z
External Id	SAMEA7321336
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:43:12Z
INSDC status	public
LOW_COVERAGE	151833
NO_COVERAGE	608
ReadLength	150bp
Submitter Id	55356
TCCP_ID	55356_HWWJFAFXY_GCAAGAT_S5
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	Agile antechinus
decimal_latitude	-38
decimal_longitude	140.97
depthmean	172.89
depthmedian	130
family	Dasyuridae
genus	Antechinus
geographic location (region and locality)	South Australia
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	5.5km N, Mount Ruskin, Lower Glenelg River Conservation Park
order	Dasyuromorphia
phylum	Chordata
scientific_name	Antechinus agilis
sequencing method	Illumina SBS, short PE reads
species	agilis
state_or_region	South Australia
tissue_number	ABTC79327
tissue_preservation	ethanol \| frozen
totalmapped2tgt	0.7427
totalpaired	0.728
totalreadsstart	3239507
voucher_number	SAMA M23166
voucher_or_tissue_number	SAMA M23166

BioProject: PRJEB39788 Australian marsupial phylogeny
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