Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Antechinus minimus (swamp antechinus)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Antechinus

Attributes

geographic location	Australia
investigation type	phylogenetic study
sample name	55357
sex	not determined
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/4dbe44ba-bf0e-4752-a13b-7e18b4151134
BPA_library_ID	55357
BPA_sample_ID	41946
CALLABLE	1503842
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:43:15Z
External Id	SAMEA7321337
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:43:15Z
INSDC status	public
LOW_COVERAGE	148579
NO_COVERAGE	123
ReadLength	150bp
Submitter Id	55357
TCCP_ID	55357_HWWJFAFXY_ACTATCA_S13
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	swamp antechinus
decimal_latitude	-37.3
decimal_longitude	139.9
depthmean	105.39
depthmedian	80
family	Dasyuridae
genus	Antechinus
geographic location (region and locality)	South Australia
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	19.5km SE, Robe, Lake St Claire, SE
order	Dasyuromorphia
phylum	Chordata
scientific_name	Antechinus minimus
sequencing method	Illumina SBS, short PE reads
species	minimus
state_or_region	South Australia
tissue_number	ABTC79393
tissue_preservation	ethanol \| frozen
totalmapped2tgt	0.7835
totalpaired	0.7727
totalreadsstart	1740879
voucher_number	SAMA M22403
voucher_or_tissue_number	SAMA M22403