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Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

Identifiers
BioSample: SAMEA7321341; SRA: ERS5079876
Organism
Pseudochirops archeri (green ringtail possum)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Pseudocheiridae; Pseudochirops
Attributes
geographic locationAustralia
investigation typephylogenetic study
sample name55361
sexnot determined
tissueliver
AtlasLivingAustraliahttps://biocache.ala.org.au/occurrences/c968bb55-0b30-448a-a54b-d065b3a524dc
BPA_library_ID55361
BPA_sample_ID41950
CALLABLE1107757
DNA extraction methodsalting out
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2021-01-05T04:27:29Z
ENA-LAST-UPDATE2020-09-25T00:43:21Z
External IdSAMEA7321341
INSDC center nameAUSTRALIAN NATIONAL UNIVERSITY
INSDC first public2021-01-05T04:27:29Z
INSDC last update2020-09-25T00:43:21Z
INSDC statuspublic
LOW_COVERAGE119610
NO_COVERAGE380
ReadLength150bp
Submitter Id55361
TCCP_ID55361_HWWJFAFXY_AGCAGGT_S45
bioproject_accessionPRJEB39788
classMammalia
collectionMammal
common namegreen ringtail possum
decimal_latitude-17.7
decimal_longitude145.52
depthmean113.8
depthmedian58
familyPseudocheiridae
genusPseudochirops
geographic location (region and locality)Queensland
institution_nameAustralian Biological Tissue Collection, South Australian Museum
location_textCharsmillan Creek
orderDiprotodontia
phylumChordata
scientific_namePseudochirops archeri
sequencing methodIllumina SBS, short PE reads
speciesarcheri
state_or_regionQueensland
tissue_numberABTC83057
tissue_preservationethanol
totalmapped2tgt0.5732
totalpaired0.5411
totalreadsstart2145224
voucher_numberAM M.23700
voucher_or_tissue_numberAM M.23700
BioProject
PRJEB39788 Australian marsupial phylogeny
Retrieve all samples from this project

Submission
EBI; 2021-01-06
Accession:
SAMEA7321341
ID:
17239797

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