Australian marsupial phylogenetic study. Bioplatfo... - BioSample

Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

Organism: Pseudantechinus macdonnellensis (fat-tailed pseudantechinus)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Pseudantechinus

Attributes

geographic location	Australia
identified by	Steve Donnellan
investigation type	phylogenetic study
sample name	55364
sex	female
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/33cf2765-6f7b-434c-ac5f-d5dfcb2a0b9a
BPA_library_ID	55364
BPA_sample_ID	41953
CALLABLE	1526228
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:43:26Z
External Id	SAMEA7321344
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:43:26Z
INSDC status	public
LOW_COVERAGE	104367
NO_COVERAGE	104
ReadLength	150bp
Submitter Id	55364
TCCP_ID	55364_HWWJFAFXY_AACCTGC_S69
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	fat-tailed pseudantechinus
decimal_latitude	-24.89
decimal_longitude	128.77
depthmean	407.87
depthmedian	295
family	Dasyuridae
genus	Pseudantechinus
geographic location (region and locality)	Western Australia
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	Kutjuntari Rockhole
order	Dasyuromorphia
phylum	Chordata
scientific_name	Pseudantechinus macdonnellensis
sequencing method	Illumina SBS, short PE reads
species	macdonnellensis
state_or_region	Western Australia
tissue_number	ABTC91466
tissue_preservation	ethanol \| frozen
totalmapped2tgt	0.6308
totalpaired	0.6129
totalreadsstart	8539539
voucher_number	WAM M62312
voucher_or_tissue_number	WAM M62312

BioProject: PRJEB39788 Australian marsupial phylogeny
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