Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Echymipera rufescens (long-nosed echymipera)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Peramelemorphia; Peroryctidae; Echymipera

Attributes

geographic location	Indonesia
investigation type	phylogenetic study
sample name	55388
sex	male
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/0bb373d8-85f7-4522-9b7e-c83e27a0ddb9
BPA_library_ID	55388
BPA_sample_ID	41979
CALLABLE	1235904
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:44:04Z
External Id	SAMEA7321361
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:44:04Z
INSDC status	public
LOW_COVERAGE	166725
NO_COVERAGE	0
ReadLength	150bp
Submitter Id	55388
TCCP_ID	55388_HWWJFAFXY_CCAACCT_S79
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	long-nosed echymipera
depthmean	43.21
depthmedian	32
family	Peramelidae
genus	Echymipera
geographic location (region and locality)	Maluku Province
institution_name	Western Australian Museum
location_text	Kai Besar Island
order	Peramelemorphia
phylum	Chordata
scientific_name	Echymipera rufescens
sequencing method	Illumina SBS, short PE reads
species	rufescens
state_or_region	Maluku Province
tissue_number	WAM M42685
totalmapped2tgt	0.6447
totalpaired	0.6006
totalreadsstart	790799
voucher_number	WAM M42685
voucher_or_tissue_number	WAM M42685