Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Phalanger carmelitae (mountain cuscus)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Phalangeridae; Phalanger

Attributes

geographic location	Papua New Guinea
investigation type	phylogenetic study
sample name	40098
sex	female
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/26cb332c-3338-4722-a8f1-deda56cb96ac
BPA_library_ID	52729
BPA_sample_ID	40098
CALLABLE	891953
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:34Z
ENA-LAST-UPDATE	2020-09-29T08:18:00Z
External Id	SAMEA7354544
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:34Z
INSDC last update	2020-09-29T08:18:00Z
INSDC status	public
LOW_COVERAGE	45225
NO_COVERAGE	210
ReadLength	100bp
Submitter Id	40098
TCCP_ID	40098_LANES3
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammalogy
common name	mountain cuscus
decimal_latitude	-6.25
decimal_longitude	142.78
depthmean	336.67
depthmedian	88
family	Phalangeridae
genus	Phalanger
geographic location (region and locality)	Southern Highlands Province
institution_name	Australian Museum
location_text	Namosado Village
order	Diprotodontia
phylum	Chordata
scientific_name	Phalanger carmelitae
sequencing method	Illumina SBS, short PE reads
species	mimicus
state_or_region	Southern Highlands Province
tissue_number	EBU13686
tissue_preservation	frozen
totalmapped2tgt	0.4007
totalpaired	0.3165
totalreadsstart	10196875
voucher_number	AM M.16271.001
voucher_or_tissue_number	AM M.16271.001
wild_captive	wild