metagenome-assembled genome

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Result Filters

Organism: Porphyromonas gingivalis
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas

Attributes

collection date	not provided
broad-scale environmental context	human-associated habitat
local-scale environmental context	human oral cavity
environmental medium	not provided
geographic location	not provided
investigation type	metagenome-assembled genome
isolation source	not provided
project name	Human Oral MAGs
sample name	SRR9217400-mag-bin.3
ENA first public	2021-03-23
ENA last update	2021-03-22
ENA-CHECKLIST	ERC000047
External Id	SAMEA8395139
INSDC center alias	EMG
INSDC center name	EMG
INSDC first public	2021-03-23T08:57:14Z
INSDC last update	2021-03-22T20:42:53Z
INSDC status	public
Submitter Id	SRR9217400-mag-bin.3
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	metaspades_v3.14.1
binning parameters	default
binning software	MetaWRAP v1.1
broker name	EMG broker account, EMBL-EBI
completeness score	99.92
completeness software	CheckM v1.1.3
contamination score	0
geographic location (latitude)	not provided
geographic location (longitude)	not provided
metagenomic source	human oral metagenome
sample derived from	SRS4893176
sequencing method	Illumina
taxonomic identity marker	multi-marker approach