Metagenome-assembled genome: DRR093004_bin.6_MetaB... - BioSample

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Result Filters

Organism: uncultured bacterium
cellular organisms; Bacteria; environmental samples

Attributes

collection date	2010-06-16
broad-scale environmental context	aquatic
local-scale environmental context	marine
environmental medium	water
geographic location	not provided
investigation type	metagenome-assembled genome
isolation source	marine metagenome
project name	Shotgun metagenomic sequences were obtained from sub-seafloor massive sulfide deposits to reconstruct genomes of yet-uncultivated microbes.
sample name	DRR093004_bin.6_MetaBAT_v2.12.1_MAG
ENA first public	2021-09-16
ENA last update	2021-09-16
ENA-CHECKLIST	ERC000047
External Id	SAMEA9695274
INSDC center alias	EMG
INSDC center name	EMG
INSDC first public	2021-09-16T16:25:22Z
INSDC last update	2021-09-16T16:25:22Z
INSDC status	public
Submitter Id	DRR093004_bin.6_MetaBAT_v2.12.1_MAG
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	metaspadesv3.11.1
binning parameters	Default
binning software	MetaBAT v2.12.1
broker name	EMG broker account, EMBL-EBI
completeness score	98.15
completeness software	CheckM
contamination score	0.77
geographic location (latitude)	12.93
geographic location (longitude)	143.62
metagenomic source	marine metagenome
sample derived from	SAMD00080627
sequencing method	Illumina MiSeq
taxonomic identity marker	multi-marker approach

Description: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run DRR093004 of study DRP003947.