MIGS Cultured Bacterial/Archaeal sample from Liste... - BioSample

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Result Filters

Identifiers: BioSample: SAMN00001446; Sample name: BCM-HMP0075; SRA: SRS001904

Organism: Listeria grayi DSM 20601
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria grayi

Attributes

strain	DSM 20601
estimated size	2572000
culture collection	DSM:20601
local-scale environmental context	Homo sapiens-associated habitat [ENVO:00009003]
investigation type	missing
host taxonomy ID	9606 (9606)
environmental medium	biological product [ENVO:02000043]
number of replicons	not determined
reference for biomaterial	not determined
geographic location	not determined
broad-scale environmental context	terrestrial biome [ENVO:00000446]
latitude and longitude	not determined
environmental package	missing
collection date	not determined
host	Homo sapiens
isolation and growth condition	not determined
source material identifiers	DSM 20601, ATCC 19120
project name	Listeria grayi DSM 20601
isolation source	missing
misc_param: HMP supersite	gastrointestinal_tract
project_type	Reference Genome
nucleic acid extraction	not determined
finishing strategy (depth of coverage)	Level 5: Non-contiguous Finished36.05x;6
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
sequencing method	454-GS-FLX
assembly	Newbler v. 1.1.03.24
misc_param: HMP body site	not determined
type-material	type strain of Listeria grayi