MIGS Cultured Bacterial/Archaeal sample from Staph... - BioSample

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Result Filters

Identifiers: BioSample: SAMN00001489; Sample name: BCM-HMP0027; SRA: SRS001954

Organism: Staphylococcus aureus subsp. aureus TCH70
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus

Attributes

strain	TCH70
estimated size	2823000
local-scale environmental context	Homo sapiens-associated habitat [ENVO:00009003]
investigation type	missing
host taxonomy ID	9606 (9606)
environmental medium	biological product [ENVO:02000043]
number of replicons	not determined
reference for biomaterial	not determined
geographic location	not determined
broad-scale environmental context	terrestrial biome [ENVO:00000446]
latitude and longitude	not determined
environmental package	missing
collection date	not determined
host	Homo sapiens
isolation and growth condition	not determined
source material identifiers	BEI HM-139
project name	Staphylococcus aureus aureus TCH70
isolation source	missing
sub species	aureus
misc_param: HMP supersite	skin
project_type	Reference Genome
nucleic acid extraction	not determined
finishing strategy (depth of coverage)	Level 3: Improved-High-Quality Draft29.35x;18
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
sequencing method	454-GS-FLX, Illumina
assembly	Newbler v. 1.1.03.24
misc_param: HMP body site	not determined