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MIGS Cultured Bacterial/Archaeal sample from Bacteroides xylanisolvens SD CC 1b

Identifiers
BioSample: SAMN00007489; Sample name: Bacteroides Genomes #1b Sample; SRA: SRS009829
Organism
Bacteroides xylanisolvens SD CC 1b
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides xylanisolvens
Package
MIGS: cultured bacteria/archaea; version 6.0
Attributes
collection datenot determined
estimated size6060000
isolation and growth conditionnot determined
hostHomo sapiens
latitude and longitudenot determined
broad-scale environmental contextterrestrial biome [ENVO:00000446]
investigation typemissing
local-scale environmental contexthuman-associated habitat [ENVO:00009003]
host taxonomy ID9606 (9606)
project nameBacteroides xylanisolvens SD CC 1b
geographic locationnot determined
source material identifiersnot determined
environmental mediumbiological product [ENVO:02000043]
reference for biomaterialnot determined
number of repliconsnot determined
strainSD CC 1b
environmental packagemissing
isolation sourcemissing
finishing strategy (depth of coverage)Level 2: High-Quality Draft17x;236
project_typeReference Genome
misc_param: HMP body sitenot determined
nucleic acid extractionnot determined
assemblyNewbler v. 1.1.03.24-64-7
misc_param: HMP supersitegastrointestinal_tract
sequencing method454
sophttp://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
Description

Partial genome sequencing of Australian HMP10 using 454 technology

Keywords: GSC:MIxS;MIGS:6.0

BioProject
PRJNA42773 Bacteroides xylanisolvens SD CC 1b strain:SD CC 1b
Retrieve all samples from this project

Submission
JCVI; 2010-01-14
Accession:
SAMN00007489
ID:
7489

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