MIGS Cultured Bacterial/Archaeal sample from Pepto... - BioSample

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Result Filters

Organism: Peptoniphilus duerdenii ATCC BAA-1640
cellular organisms; Bacteria; Bacillati; Bacillota; Tissierellia; Tissierellales; Peptoniphilaceae; Peptoniphilus; Peptoniphilus duerdenii

Attributes

collection date	not determined
estimated size	2082000
isolation and growth condition	not determined
host	Homo sapiens
latitude and longitude	not determined
broad-scale environmental context	terrestrial biome [ENVO:00000446]
local-scale environmental context	Homo sapiens-associated habitat [ENVO:00009003]
investigation type	missing
host taxonomy ID	9606 (9606)
project name	Peptoniphilus duerdenii ATCC BAA-1640
geographic location	not determined
source material identifiers	ATCC BAA-1640
environmental medium	biological product [ENVO:02000043]
reference for biomaterial	not determined
number of replicons	not determined
environmental package	missing
strain	ATCC BAA-1640
culture collection	ATCC:BAA-1640
isolation source	missing
finishing strategy (depth of coverage)	Level 2: High-Quality Draft36.2x;61
project_type	Reference Genome
misc_param: HMP body site	Vaginal
nucleic acid extraction	not determined
assembly	Newbler v. 2.3-10192009
misc_param: HMP supersite	urogenital_tract
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
sequencing method	454-Paired-end