MIGS Cultured Bacterial/Archaeal sample from Parab... - BioSample

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Result Filters

Organism: Parabacteroides sp. D13
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; unclassified Parabacteroides

Attributes

local-scale environmental context	human-associated habitat [ENVO:00009003]
host taxonomy ID	9606 (9606)
isolation source	missing
project name	Parabacteroides sp. D13
source material identifiers	BEI HM-77
reference for biomaterial	not determined
collection date	not determined
environmental medium	biological product [ENVO:02000043]
geographic location	not determined
latitude and longitude	not determined
environmental package	missing
broad-scale environmental context	terrestrial biome [ENVO:00000446]
host	Homo sapiens
isolation and growth condition	not determined
estimated size	5371000
strain	D13
number of replicons	not determined
investigation type	bacteria_archaea
sequencing method	454-GS-FLX, Sanger
nucleic acid extraction	not determined
misc_param: HMP supersite	gastrointestinal_tract
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
project_type	Reference Genome
finishing strategy (depth of coverage)	Level 2: High-Quality Draft23.06x;74
assembly	Newbler v. 2.0.0-PostRelease-1/21/2009
misc_param: HMP body site	not determined