MIGS Cultured Bacterial/Archaeal sample from Desul... - BioSample

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Result Filters

Organism: Desulfovibrio sp. 3_1_syn3
cellular organisms; Bacteria; Pseudomonadati; Thermodesulfobacteriota; Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio; unclassified Desulfovibrio

Attributes

broad-scale environmental context	terrestrial biome [ENVO:00000446]
collection date	not determined
estimated size	3726000
strain	3_1_syn3
latitude and longitude	not determined
source material identifiers	BEI HM-66
investigation type	bacteria_archaea
host taxonomy ID	9606 (9606)
local-scale environmental context	human-associated habitat [ENVO:00009003]
isolation and growth condition	not determined
project name	Desulfovibrio sp. 3_1_syn3
geographic location	not determined
reference for biomaterial	not determined
host	Homo sapiens
environmental medium	biological product [ENVO:02000043]
environmental package	missing
number of replicons	not determined
isolation source	missing
project_type	Reference Genome
finishing strategy (depth of coverage)	Level 2: High-Quality Draft21x;287
misc_param: HMP body site	not determined
nucleic acid extraction	not determined
misc_param: HMP supersite	gastrointestinal_tract
assembly	Newbler v. 2.1-PreRelease-4/28/2009
sequencing method	454
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf