Pathogen: environmental/food/other sample from Sal... - BioSample - NCBI

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Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica serovar Dublin

Identifiers: BioSample: SAMN03894389; Sample name: CVM N51298; SRA: SRS1101932

Organism: Salmonella enterica subsp. enterica serovar Dublin
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica

Package: Pathogen: environmental/food/other; version 1.0

Attributes

geographic location	USA: NM
strain	CVM N51298
collection date	2013
isolation source	Ground Beef
serovar	Dublin
collected by	FDA
latitude and longitude	missing
sub species	enterica
AssemblyVersion	CLC Genomics Workbench v. 6.0.2
SequencingTechnology	Illumina MiSeq

BioProjects: PRJNA292661 Salmonella enterica
Retrieve all samples from this project

PRJNA242614 Salmonella enterica
Retrieve all samples from this project

Submission: FDA, CVM FDA; 2015-07-22

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
amoxicillin-clavulanic acid	resistant	>	32/16	mg/L	MIC				CLSI
ampicillin	resistant	>	32	mg/L	MIC				CLSI
azithromycin	susceptible	==	4	mg/L	MIC				NARMS
cefoxitin	intermediate	==	16	mg/L	MIC				CLSI
ceftiofur	intermediate	==	4	mg/L	MIC				CLSI
ceftriaxone	resistant	==	4	mg/L	MIC				CLSI
chloramphenicol	resistant	>	32	mg/L	MIC				CLSI
ciprofloxacin	susceptible	<=	0.015	mg/L	MIC				CLSI
gentamicin	susceptible	==	0.5	mg/L	MIC				CLSI
kanamycin	susceptible	<=	8	mg/L	MIC				CLSI
nalidixic acid	susceptible	==	4	mg/L	MIC				CLSI
streptomycin	resistant	>	64	mg/L	MIC				NARMS
sulfisoxazole	resistant	>	256	mg/L	MIC				CLSI
tetracycline	resistant	>	32	mg/L	MIC				CLSI
trimethoprim-sulfamethoxazole	susceptible	<=	0.125/2.4	mg/L	MIC				CLSI

Accession:: SAMN03894389
ID:: 3894389

BioProject SRA Nucleotide

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