Pathogen: environmental/food/other sample from Sal... - BioSample - NCBI

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Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica serovar Infantis

Identifiers: BioSample: SAMN03988471; Sample name: CVM N55391-R; SRA: SRS1069060

Organism: Salmonella enterica subsp. enterica serovar Infantis
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica

Package: Pathogen: environmental/food/other; version 1.0

Attributes

serovar	Infantis
strain	N55391
collected by	FDA
collection date	2014
isolation source	chicken breast
geographic location	USA:TN
latitude and longitude	missing
sub species	enterica
AssemblyVersion	CLC Genomics Workbench v. 6.0.2
SequencingTechnology	Illumina MiSeq

BioProject: PRJNA292661 Salmonella enterica
Retrieve all samples from this project

Submission: FDA, CVM FDA; 2015-08-13

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
amoxicillin-clavulanic acid	susceptible	==	2/1	mg/L	MIC				CLSI
ampicillin	resistant	>	32	mg/L	MIC				CLSI
azithromycin	susceptible	==	2	mg/L	MIC				NARMS
cefoxitin	susceptible	==	4	mg/L	MIC				CLSI
ceftiofur	resistant	>	8	mg/L	MIC				CLSI
ceftriaxone	resistant	==	64	mg/L	MIC				CLSI
chloramphenicol	resistant	>	32	mg/L	MIC				CLSI
ciprofloxacin	intermediate	==	0.125	mg/L	MIC				CLSI
gentamicin	intermediate	==	8	mg/L	MIC				CLSI
nalidixic acid	resistant	>	32	mg/L	MIC				CLSI
streptomycin	susceptible	==	4	mg/L	MIC				NARMS
sulfisoxazole	susceptible	<=	16	mg/L	MIC				CLSI
tetracycline	resistant	>	32	mg/L	MIC				CLSI
trimethoprim-sulfamethoxazole	susceptible	<=	0.125/2.4	mg/L	MIC				CLSI

Accession:: SAMN03988471
ID:: 3988471

BioProject SRA Nucleotide

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