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Uncultivated Comamonadaceae bacterium UBA2121 genome recovered from SRX823372

Identifiers
BioSample: SAMN06450346; Sample name: Comamonadaceae bacterium UBA2121; SRA: SRS2034891
Organism
Comamonadaceae bacterium UBA2121
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Burkholderiales; Comamonadaceae; unclassified Comamonadaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA2121
isolation sourcewood
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX823372 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated99.54%
contamination_estimated0.62%
environmental_sampletrue
genome_coverage188.74
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749989.
Description

Uncultivated genome recovered from an assembly of the SRX823372 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06450346
ID:
6450346

BioProject SRA Nucleotide

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