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Uncultivated Nitrospiraceae bacterium UBA3562 genome recovered from SRX742692

Identifiers
BioSample: SAMN06451000; Sample name: Nitrospiraceae bacterium UBA3562; SRA: SRS2036249
Organism
Nitrospiraceae bacterium UBA3562
cellular organisms; Bacteria; Pseudomonadati; Nitrospirota; Nitrospiria; Nitrospirales; Nitrospiraceae; unclassified Nitrospiraceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationPacific Ocean
isolateUBA3562
isolation sourcesediment
metagenome sourcemarine sediment metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX742692 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated93.64%
contamination_estimated3.36%
environmental_sampletrue
genome_coverage49.33
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine sediment metagenome reads: SRR1628697.
Description

Uncultivated genome recovered from an assembly of the SRX742692 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451000
ID:
6451000

BioProject SRA Nucleotide

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