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Uncultivated Opitutae bacterium UBA7397 genome recovered from SRX332015

Identifiers
BioSample: SAMN06452346; Sample name: Opitutae bacterium UBA7397; SRA: SRS2033706
Organism
Opitutia bacterium UBA7397
cellular organisms; Bacteria; Pseudomonadati; PVC group; Verrucomicrobiota; Opitutia; unclassified Opitutia
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA: Georgia
isolateUBA7397
isolation sourceLake Lanier
metagenome sourcefreshwater metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX332015 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated90.20%
contamination_estimated0.68%
environmental_sampletrue
genome_coverage63.03
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the freshwater metagenome reads: SRR948448.
Description

Uncultivated genome recovered from an assembly of the SRX332015 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06452346
ID:
6452346

BioProject SRA Nucleotide

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