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Uncultivated Flavobacterium sp. UBA7680 genome recovered from SRX272783

Identifiers
BioSample: SAMN06452857; Sample name: Flavobacterium sp. UBA7680; SRA: SRS2032733
Organism
Flavobacterium sp. UBA7680
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium; unclassified Flavobacterium
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationGermany: Hamburg-Reitbrook
isolateUBA7680
isolation sourcewater
metagenome sourcebiofilm metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX272783 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated95.54%
contamination_estimated4.99%
environmental_sampletrue
genome_coverage32.74
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the biofilm metagenome reads: SRR845265.
Description

Uncultivated genome recovered from an assembly of the SRX272783 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06452857
ID:
6452857

BioProject SRA Nucleotide

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