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Uncultivated Clostridium sporogenes UBA3898 genome recovered from SRX822749

Identifiers
BioSample: SAMN06453098; Sample name: Clostridium sporogenes UBA3898; SRA: SRS2039178
Organism
Clostridium sporogenes
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Clostridiaceae; Clostridium
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA3898
isolation sourcemetal/plastic
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX822749 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated89.36%
contamination_estimated0.69%
environmental_sampletrue
genome_coverage7.48
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749366.
Description

Uncultivated genome recovered from an assembly of the SRX822749 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06453098
ID:
6453098

BioProject SRA Nucleotide

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