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Uncultivated Burkholderiales bacterium UBA1834 genome recovered from SRX702749

Identifiers
BioSample: SAMN06453458; Sample name: Burkholderiales bacterium UBA1834; SRA: SRS2036121
Organism
Burkholderiales bacterium UBA1834
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Burkholderiales; unclassified Burkholderiales
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationSpain: Alfacada pond, Ebro delta, Tarragona
isolateUBA1834
isolation sourceepidermal mucus of Anguilla anguilla fishes in Ebro delta
metagenome sourcefish metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX702749 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated89.60%
contamination_estimated1.64%
environmental_sampletrue
genome_coverage14.86
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the fish metagenome reads: SRR1578065.
Description

Uncultivated genome recovered from an assembly of the SRX702749 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06453458
ID:
6453458

BioProject SRA Nucleotide

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