U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Bacteroides coprophilus UBA712 genome recovered from SRX1166928

Identifiers
BioSample: SAMN06453699; Sample name: Bacteroides coprophilus UBA712; SRA: SRS2032207
Organism
Phocaeicola coprophilus
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationChina: Jiangsu province
isolateUBA712
isolation sourcemouse intestine 0group
metagenome sourcemouse gut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX1166928 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated73.13%
contamination_estimated1.59%
environmental_sampletrue
genome_coverage13.23
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the mouse gut metagenome reads: SRR2190826.
Description

Uncultivated genome recovered from an assembly of the SRX1166928 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06453699
ID:
6453699

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center