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Uncultivated Klebsiella oxytoca UBA5669 genome recovered from SRX822306

Identifiers
BioSample: SAMN06453726; Sample name: Klebsiella oxytoca UBA5669; SRA: SRS2038733
Organism
Klebsiella oxytoca
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA5669
isolation sourcemetal
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX822306 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated97.70%
contamination_estimated0.29%
environmental_sampletrue
genome_coverage54.58
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1748923.
Description

Uncultivated genome recovered from an assembly of the SRX822306 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06453726
ID:
6453726

BioProject SRA Nucleotide

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