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Uncultivated Proteobacteria bacterium UBA2008 genome recovered from SRX1044556

Identifiers
BioSample: SAMN06454198; Sample name: Proteobacteria bacterium UBA2008; SRA: SRS2032040
Organism
Proteobacteria bacterium UBA2008
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; unclassified Pseudomonadota
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationAtlantic Ocean:Mid Cayman Rise
isolateUBA2008
isolation sourceBeebe hydrothermal vent plume at depth 4869m
metagenome sourcehydrothermal vent metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX1044556 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated69.51%
contamination_estimated1.22%
environmental_sampletrue
genome_coverage116.14
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the hydrothermal vent metagenome reads: SRR2046237.
Description

Uncultivated genome recovered from an assembly of the SRX1044556 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454198
ID:
6454198

BioProject SRA Nucleotide

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