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Uncultivated Psychrobacter sp. UBA3962 genome recovered from SRX822697

Identifiers
BioSample: SAMN06454531; Sample name: Psychrobacter sp. UBA3962; SRA: SRS2039116
Organism
Psychrobacter sp. UBA3962
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Moraxellales; Moraxellaceae; Psychrobacter; unclassified Psychrobacter
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA3962
isolation sourcemetal/plastic
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX822697 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated99.93%
contamination_estimated0.35%
environmental_sampletrue
genome_coverage28.23
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749314.
Description

Uncultivated genome recovered from an assembly of the SRX822697 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454531
ID:
6454531

BioProject SRA Nucleotide

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