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Uncultivated Rhodobiaceae bacterium UBA5957 genome recovered from SRX514549

Identifiers
BioSample: SAMN06454569; Sample name: Rhodobiaceae bacterium UBA5957; SRA: SRS2034126
Organism
Rhodobiaceae bacterium UBA5957
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhodobiaceae; unclassified Rhodobiaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationAtlantic Ocean: Sargasso Sea
isolateUBA5957
isolation sourcewater
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX514549 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated87.54%
contamination_estimated0.58%
environmental_sampletrue
genome_coverage14.66
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: SRR1230756.
Description

Uncultivated genome recovered from an assembly of the SRX514549 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454569
ID:
6454569

BioProject SRA Nucleotide

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