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Uncultivated Gemmatimonas sp. UBA2094 genome recovered from SRX1162701

Identifiers
BioSample: SAMN06454934; Sample name: Gemmatimonas sp. UBA2094; SRA: SRS2032201
Organism
Gemmatimonas sp. UBA2094
cellular organisms; Bacteria; Pseudomonadati; FCB group; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas; unclassified Gemmatimonas
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:Highgate Springs, VT
isolateUBA2094
isolation sourcefreshwater
metagenome sourcefreshwater metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX1162701 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated63.90%
contamination_estimated0.50%
environmental_sampletrue
genome_coverage39.18
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the freshwater metagenome reads: SRR2179954.
Description

Uncultivated genome recovered from an assembly of the SRX1162701 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454934
ID:
6454934

BioProject SRA Nucleotide

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