Uncultivated Pseudomonas stutzeri UBA5863 genome r... - BioSample

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Result Filters

Identifiers: BioSample: SAMN06455226; Sample name: Pseudomonas stutzeri UBA5863; SRA: SRS2039268

Organism: Stutzerimonas kunmingensis
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Stutzerimonas; Stutzerimonas stutzeri group; Stutzerimonas stutzeri subgroup

Attributes

isolation source	metal/plastic
collection date	not applicable
geographic location	USA:New York City
sample type	metagenomic assembly
isolate	UBA5863
metagenome source	terrestrial metagenome
subsource note	Genome binned from sequencing reads available in SRX822907 metagenome
note2	Originally submitted as Pseudomonas stutzeri but changed in July 2019 because of ANI results to Pseudomonas kunmingensis.
assembly_method	CLC de novo assembler
assembly_method_version	4.4.1
completeness_estimated	95.90%
contamination_estimated	0.27%
environmental_sample	true
genome_coverage	80.47
mapping_method	BWA (BWA-MEM)
mapping_method_version	0.7.12-r1039
metagenomic	true
quality_assessment_method	CheckM
quality_assessment_method_version	1.0.6
value	This BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749524.