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Uncultivated Enterococcus faecium UBA4566 genome recovered from SRX822717

Identifiers
BioSample: SAMN06455503; Sample name: Enterococcus faecium UBA4566; SRA: SRS2039133
Organism
Enterococcus faecium
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA4566
isolation sourcewood
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX822717 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated99.62%
contamination_estimated0.38%
environmental_sampletrue
genome_coverage20.85
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749334.
Description

Uncultivated genome recovered from an assembly of the SRX822717 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455503
ID:
6455503

BioProject SRA Nucleotide

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