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Uncultivated Acetobacter syzygii UBA5801 genome recovered from SRX1363839

Identifiers
BioSample: SAMN06455559; Sample name: Acetobacter syzygii UBA5801; SRA: SRS2032275
Organism
Acetobacter syzygii
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Acetobacterales; Acetobacteraceae; Acetobacter
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationColombia: Santander de Quilichao
isolateUBA5801
isolation sourcecassava fermentation tank
metagenome sourcefermentation metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX1363839 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated77.72%
contamination_estimated1.59%
environmental_sampletrue
genome_coverage32.25
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the fermentation metagenome reads: SRR2753158.
Description

Uncultivated genome recovered from an assembly of the SRX1363839 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455559
ID:
6455559

BioProject SRA Nucleotide

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