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Uncultivated Gammaproteobacteria bacterium UBA1853 genome recovered from ERX288947

Identifiers
BioSample: SAMN06455696; Sample name: Gammaproteobacteria bacterium UBA1853; SRA: SRS2030574
Organism
Gammaproteobacteria bacterium UBA1853
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; unclassified Gammaproteobacteria
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA1853
isolation sourceTara Oceans DNA samples corresponding to size fractions for protist
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX288947 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated72.92%
contamination_estimated1.37%
environmental_sampletrue
genome_coverage8.83
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR315802.
Description

Uncultivated genome recovered from an assembly of the ERX288947 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455696
ID:
6455696

BioProject SRA Nucleotide

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