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Uncultivated Helicobacteraceae bacterium UBA6016 genome recovered from SRX319064

Identifiers
BioSample: SAMN06455895; Sample name: Helicobacteraceae bacterium UBA6016; SRA: SRS2033227
Organism
Helicobacteraceae bacterium UBA6016
cellular organisms; Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; unclassified Helicobacteraceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA6016
isolation sourcewater
metagenome sourcemicrobial mat metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX319064 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated88.64%
contamination_estimated0.91%
environmental_sampletrue
genome_coverage17.1
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the microbial mat metagenome reads: SRR931294.
Description

Uncultivated genome recovered from an assembly of the SRX319064 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455895
ID:
6455895

BioProject SRA Nucleotide

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