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Uncultivated Staphylococcus saprophyticus UBA1840 genome recovered from SRX822638

Identifiers
BioSample: SAMN06456504; Sample name: Staphylococcus saprophyticus UBA1840; SRA: SRS2039071
Organism
Staphylococcus saprophyticus
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA1840
isolation sourcemetal
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX822638 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated98.87%
contamination_estimated0.00%
environmental_sampletrue
genome_coverage22.49
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749255.
Description

Uncultivated genome recovered from an assembly of the SRX822638 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06456504
ID:
6456504

BioProject SRA Nucleotide

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