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Uncultivated Gammaproteobacteria bacterium UBA5862 genome recovered from SRX696248

Identifiers
BioSample: SAMN06457330; Sample name: Gammaproteobacteria bacterium UBA5862; SRA: SRS2036108
Organism
Gammaproteobacteria bacterium UBA5862
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; unclassified Gammaproteobacteria
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA: Municipal Pensacola Beach, FL
isolateUBA5862
isolation sourcebeach sand
metagenome sourcebeach sand metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX696248 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated67.41%
contamination_estimated1.23%
environmental_sampletrue
genome_coverage6.28
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the beach sand metagenome reads: SRR1570769.
Description

Uncultivated genome recovered from an assembly of the SRX696248 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06457330
ID:
6457330

BioProject SRA Nucleotide

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