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Uncultivated Sphaerochaeta sp. UBA7781 genome recovered from SRX331741

Identifiers
BioSample: SAMN06457751; Sample name: Sphaerochaeta sp. UBA7781; SRA: SRS2033617
Organism
Sphaerochaeta sp. UBA7781
cellular organisms; Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia; Spirochaetales; Sphaerochaetaceae; Sphaerochaeta; unclassified Sphaerochaeta
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA: Wyoming
isolateUBA7781
isolation sourceRumen fluid
metagenome sourcegut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX331741 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated80.65%
contamination_estimated3.66%
environmental_sampletrue
genome_coverage9.81
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR948125.
Description

Uncultivated genome recovered from an assembly of the SRX331741 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06457751
ID:
6457751

BioProject SRA Nucleotide

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