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Uncultivated Lactobacillus sp. UBA11933 genome recovered from SRX803752

Identifiers
BioSample: SAMN08017456; Sample name: UBA11933; SRA: SRS2847690
Organism
Lactobacillus sp.
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; unclassified Lactobacillus
Package
Microbe; version 1.0
Attributes
isolateUBA11933
isolation sourcerat gut
collection datenot applicable
geographic locationnot applicable
sample typemetagenomic assembly
metagenome sourcerat gut metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
genome_coverage16.28x
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
completeness_estimated82.27%
contamination_estimated0.10%
environmental_sampletrue
metagenomictrue
noterat gut metagenome
valueThis BioSample is a metagenomic assembly obtained from the rat gut metagenome reads: SRR1702554.
Description

Uncultivated genome recovered from an assembly of the SRX803752 metagenome.

BioProject
PRJNA417962 metagenome-assembled genomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-11-13
Accession:
SAMN08017456
ID:
8017456

BioProject SRA Nucleotide

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