U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Saprospirales bacterium UBA10441 genome recovered from ERX682739

Identifiers
BioSample: SAMN08017490; Sample name: UBA10441; SRA: SRS2843406
Organism
Saprospirales bacterium
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Saprospiria; Saprospirales; unclassified Saprospirales
Package
Microbe; version 1.0
Attributes
isolateUBA10441
isolation sourcefreshwater
collection datenot applicable
geographic locationnot applicable
sample typemetagenomic assembly
metagenome sourcefreshwater bacterium LH6-2 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
genome_coverage8.36x
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
completeness_estimated75.75%
contamination_estimated4.35%
environmental_sampletrue
metagenomictrue
notefreshwater bacterium LH6-2 metagenome
valueThis BioSample is a metagenomic assembly obtained from the freshwater bacterium LH6-2 metagenome reads: ERR739056.
Description

Uncultivated genome recovered from an assembly of the ERX682739 metagenome.

BioProject
PRJNA417962 metagenome-assembled genomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-11-13
Accession:
SAMN08017490
ID:
8017490

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center