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Uncultivated Pseudomonas bacterium UBA12307 genome recovered from SRX691268

Identifiers
BioSample: SAMN08017501; Sample name: UBA12307; SRA: SRS2846950
Organism
Pseudomonas sp.
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; unclassified Pseudomonas
Package
Microbe; version 1.0
Attributes
isolateUBA12307
isolation sourcefermentation
collection datenot applicable
geographic locationnot applicable
sample typemetagenomic assembly
metagenome sourcefermentation metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
genome_coverage69.71x
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
completeness_estimated64.03%
contamination_estimated6.56%
environmental_sampletrue
metagenomictrue
notefermentation metagenome
valueThis BioSample is a metagenomic assembly obtained from the fermentation metagenome reads: SRR1561993.
Description

Uncultivated genome recovered from an assembly of the SRX691268 metagenome.

BioProject
PRJNA417962 metagenome-assembled genomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-11-13
Accession:
SAMN08017501
ID:
8017501

BioProject SRA Nucleotide

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