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Uncultivated Lachnospiraceae bacterium UBA11949 genome recovered from SRX803756

Identifiers
BioSample: SAMN08018976; Sample name: UBA11949; SRA: SRS2847128
Organism
Lachnospiraceae bacterium
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; unclassified Lachnospiraceae
Package
Microbe; version 1.0
Attributes
isolateUBA11949
isolation sourcerat gut
collection datenot applicable
geographic locationnot applicable
sample typemetagenomic assembly
metagenome sourcerat gut metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
genome_coverage15.04x
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
completeness_estimated63.16%
contamination_estimated2.47%
environmental_sampletrue
metagenomictrue
noterat gut metagenome
valueThis BioSample is a metagenomic assembly obtained from the rat gut metagenome reads: SRR1702558.
Description

Uncultivated genome recovered from an assembly of the SRX803756 metagenome.

BioProject
PRJNA417962 metagenome-assembled genomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-11-13
Accession:
SAMN08018976
ID:
8018976

BioProject SRA Nucleotide

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